encode_layers - CLI interface

Encode raster and / or vector layers into a site by layer matrix.

encode_layers [-h] [--config_file CONFIG_FILE] [--log_filename LOG_FILENAME] [--log_console]
              [-r REPORT_FILENAME]
              [--encode_method {biogeo,presence_absence,largest_class,mean_value}]
              [--min_coverage MIN_COVERAGE] [--min_presence MIN_PRESENCE]
              [--max_presence MAX_PRESENCE] [--layer [LAYER [LAYER ...]]]
              [--layer_file_pattern LAYER_FILE_PATTERN]
              grid_filename out_matrix_filename

encode_layers positional arguments

  • grid_filename - File location of grid to use for site geometries. (default: None)

  • out_matrix_filename - File location to write the encoded matrix. (default: None)

encode_layers optional arguments

  • -h, --help - show this help message and exit

  • --config_file CONFIG_FILE - Path to configuration file. (default: None)

  • --log_filename LOG_FILENAME, -l LOG_FILENAME - A file location to write logging data. (default: None)

  • --log_console - If provided, write log to console.

  • -r REPORT_FILENAME, --report_filename REPORT_FILENAME - File location to write the wrangler report. (default: None)

  • --encode_method ENCODE_METHOD, -m ENCODE_METHOD - The method to use to encode each layer. (default: mean_value)

  • --min_coverage MIN_COVERAGE - Minimum percentage of a cell that has to be covered to encode it. (default: 25)

  • --min_presence MIN_PRESENCE - Minimum value to be considered present when encoding presence absence. (default: 10)

  • --max_presence MAX_PRESENCE - The maximum value that should be considered present. (default: 127)

  • --layer LAYER - File location of layer [ LABEL [ ATTRIBUTE FIELD ]]. (default: None)

  • --layer_file_pattern LAYER_FILE_PATTERN - File pattern to one or more layers. (default: None)