convert_csv_to_lmm - CLI interface

Convert a CSV file of numerical values into a lmpy Matrix.

convert_csv_to_lmm [-h] [--config_file CONFIG_FILE] [--log_filename LOG_FILENAME]
                   [--log_console] [-r REPORT_FILENAME] [--data_type {float,int}]
                   [--header_rows HEADER_ROWS] [--header_cols HEADER_COLS]
                   in_csv_filename out_lmm_filename

convert_csv_to_lmm positional arguments

convert_csv_to_lmm optional arguments

  • -h, --help - show this help message and exit

  • --config_file CONFIG_FILE - Path to configuration file. (default: None)

  • --log_filename LOG_FILENAME, -l LOG_FILENAME - A file location to write logging data. (default: None)

  • --log_console - If provided, write log to console.

  • -r REPORT_FILENAME, --report_filename REPORT_FILENAME - File location to write the wrangler report. (default: None)

  • --data_type DATA_TYPE - The data type of the values in the CSV, options are float or int. (default: float)

  • --header_rows HEADER_ROWS - The number of header rows in the CSV. (default: 0)

  • --header_cols HEADER_COLS - The number of header columns in the CSV. (default: 0)